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The UP College of Pharmacy provides a diverse range of degree programs, including two undergraduate and two graduate options. Among the undergraduate programs are the Bachelor of Science in Pharmacy and the Bachelor of Science in Pharmaceutical Sciences, both five-year programs consisting of 199 and 193 academic load units, respectively. These undergraduate programs were introduced to replace the 2005 BS Pharmacy and BS Industrial Pharmacy programs.

For graduate studies, the College offers the Master of Science in Pharmaceutical Sciences (MS PS) and the Master of Science in Social and Administrative Pharmacy (MS SAP), both of which are two-year programs comprising 30 and 31 units, respectively. These programs have been introduced more recently and have replaced the former 36-unit Master of Science in Pharmacy program.

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